Multiomics analysis of O-GlcNAcylation in podocytes of diabetic kidney disease

Diabetes Obes Metab. 2025 May;27(5):2708-2719. doi: 10.1111/dom.16274. Epub 2025 Feb 14.

Abstract

Aim: To investigate the role of O-GlcNAc transferase (OGT)-mediated protein O-GlcNAcylation in podocyte injury during the progression of diabetic kidney disease (DKD).

Materials and methods: Proteomic and O-glycoproteomic analyses were conducted on high glucose (HG)-stimulated podocytes with OGT knockdown. Differentially expressed proteins and O-GlcNAcylated peptides/proteins were identified, and functional enrichment (GO, KEGG, COG/KOG) and motif analysis (motif-x) were performed using bioinformatics analysis. Co-immunoprecipitation (Co-IP) was used to validate O-GlcNAcylation of candidate proteins.

Results: OGT knockdown in HG-treated podocytes resulted in 128 upregulated and 45 downregulated proteins. Glycoproteomics revealed 32 glycopeptides/21 glycoproteins upregulated and 37 glycopeptides/22 glycoproteins downregulated. The focus was on down-regulated glycosylated proteins without changes in their protein levels. These proteins are predominantly enriched in translation factor activity, RNA binding, and ECM-receptor interactions pathways. Among these proteins, Caprin1, Lrp1, and Sil1 were modified by O-GlcNAcylation.

Conclusion: OGT-driven O-GlcNAcylation exacerbates podocyte injury in DKD by post-translationally modifying key regulators of translational machinery and ECM signalling. Precision targeting of O-GlcNAc dynamics represents a promising therapeutic strategy to attenuate DKD.

Keywords: OGT; O‐glycoproteome; diabetic kidney disease; podocytes; proteome.

MeSH terms

  • Animals
  • Diabetic Nephropathies* / metabolism
  • Diabetic Nephropathies* / pathology
  • Gene Knockdown Techniques
  • Glucose / pharmacology
  • Glycoproteins* / metabolism
  • Glycosylation
  • Humans
  • Mice
  • Multiomics
  • N-Acetylglucosaminyltransferases* / genetics
  • N-Acetylglucosaminyltransferases* / metabolism
  • Podocytes* / drug effects
  • Podocytes* / metabolism
  • Podocytes* / pathology
  • Protein Processing, Post-Translational
  • Proteomics

Substances

  • N-Acetylglucosaminyltransferases
  • O-GlcNAc transferase
  • Glycoproteins
  • Glucose