Macrophages recycle phagocytosed bacteria to fuel immunometabolic responses

Nature. 2025 Apr;640(8058):524-533. doi: 10.1038/s41586-025-08629-4. Epub 2025 Feb 26.

Abstract

Macrophages specialize in phagocytosis, a cellular process that eliminates extracellular matter, including microorganisms, through internalization and degradation1,2. Despite the critical role of phagocytosis during bacterial infection, the fate of phagocytosed microbial cargo and its impact on the host cell are poorly understood. In this study, we show that ingested bacteria constitute an alternative nutrient source that skews immunometabolic host responses. By tracing stable isotope-labelled bacteria, we found that phagolysosomal degradation of bacteria provides carbon atoms and amino acids that are recycled into various metabolic pathways, including glutathione and itaconate biosynthesis, and satisfies the bioenergetic needs of macrophages. Metabolic recycling of microbially derived nutrients is regulated by the nutrient-sensing mechanistic target of rapamycin complex C1 and is intricately tied to microbial viability. Dead bacteria, as opposed to live bacteria, are enriched in cyclic adenosine monophosphate, sustain the cellular adenosine monophosphate pool and subsequently activate adenosine monophosphate protein kinase to inhibit the mechanistic target of rapamycin complex C1. Consequently, killed bacteria strongly fuel metabolic recycling and support macrophage survival but elicit decreased reactive oxygen species production and reduced interleukin-1β secretion compared to viable bacteria. These results provide a new insight into the fate of engulfed microorganisms and highlight a microbial viability-associated metabolite that triggers host metabolic and immune responses. Our findings hold promise for shaping immunometabolic intervention for various immune-related pathologies.

MeSH terms

  • AMP-Activated Protein Kinases / metabolism
  • Amino Acids / metabolism
  • Animals
  • Bacteria* / immunology
  • Bacteria* / metabolism
  • Cyclic AMP / metabolism
  • Energy Metabolism*
  • Female
  • Glutathione / biosynthesis
  • Glutathione / metabolism
  • Interleukin-1beta / metabolism
  • Macrophages* / cytology
  • Macrophages* / immunology
  • Macrophages* / metabolism
  • Macrophages* / microbiology
  • Male
  • Mechanistic Target of Rapamycin Complex 1 / metabolism
  • Mice
  • Mice, Inbred C57BL
  • Microbial Viability
  • Phagocytosis*
  • Phagosomes / metabolism
  • Phagosomes / microbiology
  • RAW 264.7 Cells
  • Reactive Oxygen Species / metabolism
  • Succinates / metabolism

Substances

  • Amino Acids
  • AMP-Activated Protein Kinases
  • Cyclic AMP
  • Glutathione
  • Interleukin-1beta
  • itaconic acid
  • Mechanistic Target of Rapamycin Complex 1
  • Reactive Oxygen Species
  • Succinates