Janthinobacterium aestuarii sp. nov., a novel violacein-producing bacterium isolated from the Tidal Basin in Washington, D.C., USA

Int J Syst Evol Microbiol. 2025 May;75(5):006768. doi: 10.1099/ijsem.0.006768.

Abstract

Strain TB1-E2-13T was isolated from water collected from the Tidal Basin in Washington, D.C., USA, due to the bright purple colour of its colonies, and was taxonomically evaluated with a polyphasic approach. Comparison of a partial 16S rRNA gene sequence found that strain TB1-E2-13T was most similar to species in the Janthinobacterium genus. For more precise taxonomic inference, a phylogenomic analysis was conducted and indicated that strain TB1-E2-13T was most closely related to Janthinobacterium lividum, 'Janthinobacterium kumbetense', Janthinobacterium rivuli and Janthinobacterium violaceinigrum. Analyses of genomic indices found that pairwise comparisons between strain TB1-E2-13T and other members of the Janthinobacterium genus returned values below the threshold of species novelty. Based on a polyphasic characterization and identifying differences in genomic and taxonomic data, strain TB1-E2-13T represents a novel species, for which the name Janthinobacterium aestuarii sp. nov. is proposed. The type strain is TB1-E2-13T (=ATCC TSD-339T=JCM 36076T).

Keywords: Janthinobacterium; novel species; tidal basin; violacein; water.

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / genetics
  • District of Columbia
  • Fatty Acids / analysis
  • Genome, Bacterial
  • Indoles* / metabolism
  • Oxalobacteraceae* / classification
  • Oxalobacteraceae* / genetics
  • Oxalobacteraceae* / isolation & purification
  • Oxalobacteraceae* / metabolism
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Seawater* / microbiology
  • Sequence Analysis, DNA

Substances

  • RNA, Ribosomal, 16S
  • Indoles
  • DNA, Bacterial
  • violacein
  • Fatty Acids