DNA hypermethylation of PLTP mediated by DNMT3B aggravates vascular dysfunction in diabetic retinopathy via the AKT/GSK3β signaling pathway

Clin Epigenetics. 2025 May 17;17(1):82. doi: 10.1186/s13148-025-01874-4.

Abstract

Background: This study aims to elucidate the effect and mechanism of phospholipid transfer protein (PLTP) on vascular dysfunction in DR and explore the molecular mechanism of abnormal PLTP expression based on DNA methylation.

Methods: Human retinal microvascular endothelial cells (HRMECs) cultured in high glucose (HG) and streptozotocin-treated mice were used as DR models to detect and screen the key genes with abnormal promoter DNA methylation. Single-cell sequencing, tube formation and migration assays were employed to verify the relationship between PLTP and vascular function. Additionally, siRNA and luciferase reporter assay were used to study the key enzymes regulating the DNA methylation of PLTP. Transcriptome sequencing, coimmunoprecipitation and GSK3β inhibitor were utilized to identify and validate the key downstream pathways of PLTP.

Results: DR models exhibited DNA hypermethylation and decreased expression of PLTP. Abnormal PLTP expression was implicated in vascular dysfunction, and PLTP overexpression reversed HG-induced effects on the migration and tube formation of endothelial cells. The siDNMT3B and luciferase reporter assay indicated that DNMT3B is the primary enzyme affecting abnormal methylation. Interestingly, PLTP promoted the phosphorylation of AKT and GSK3β, indicating that PLTP modulates angiogenesis via the AKT/GSK3β signaling pathway.

Conclusions: PLTP regulates the proliferation, migration and tube formation of HRMECs, and is involved in maintaining vascular function via the AKT/GSK3β signaling pathway. In HG environment, increased DNMT3B expression upregulates DNA methylation of the PLTP promoter, downregulating PLTP expression and leading to vascular dysfunction in DR.

Keywords: DNA methylation; Diabetic retinopathy (DR); Epigenetics; Phospholipid transfer protein (PLTP); Vascular dysfunction.

MeSH terms

  • Animals
  • Cell Movement
  • DNA (Cytosine-5-)-Methyltransferases* / genetics
  • DNA (Cytosine-5-)-Methyltransferases* / metabolism
  • DNA Methylation*
  • DNA Methyltransferase 3B
  • Diabetes Mellitus, Experimental
  • Diabetic Retinopathy* / genetics
  • Diabetic Retinopathy* / metabolism
  • Diabetic Retinopathy* / physiopathology
  • Endothelial Cells / metabolism
  • Glycogen Synthase Kinase 3 beta* / genetics
  • Glycogen Synthase Kinase 3 beta* / metabolism
  • Humans
  • Male
  • Mice
  • Mice, Inbred C57BL
  • Phospholipid Transfer Proteins* / genetics
  • Phospholipid Transfer Proteins* / metabolism
  • Promoter Regions, Genetic
  • Proto-Oncogene Proteins c-akt / genetics
  • Proto-Oncogene Proteins c-akt / metabolism
  • Signal Transduction

Substances

  • Glycogen Synthase Kinase 3 beta
  • Proto-Oncogene Proteins c-akt
  • DNA Methyltransferase 3B
  • Phospholipid Transfer Proteins
  • DNA (Cytosine-5-)-Methyltransferases