Evolution of deep learning tooth segmentation from CT/CBCT images: a systematic review and meta-analysis

BMC Oral Health. 2025 May 26;25(1):800. doi: 10.1186/s12903-025-05984-6.

Abstract

Background: Deep learning has been utilized to segment teeth from computed tomography (CT) or cone-beam CT (CBCT). However, the performance of deep learning is unknown due to multiple models and diverse evaluation metrics. This systematic review and meta-analysis aims to evaluate the evolution and performance of deep learning in tooth segmentation.

Methods: We systematically searched PubMed, Web of Science, Scopus, IEEE Xplore, arXiv.org, and ACM for studies investigating deep learning in human tooth segmentation from CT/CBCT. Included studies were assessed using the Quality Assessment of Diagnostic Accuracy Study (QUADAS-2) tool. Data were extracted for meta-analyses by random-effects models.

Results: A total of 30 studies were included in the systematic review, and 28 of them were included for meta-analyses. Various deep learning algorithms were categorized according to the backbone network, encompassing single-stage convolutional models, convolutional models with U-Net architecture, Transformer models, convolutional models with attention mechanisms, and combinations of multiple models. Convolutional models with U-Net architecture were the most commonly used deep learning algorithms. The integration of attention mechanism within convolutional models has become a new topic. 29 evaluation metrics were identified, with Dice Similarity Coefficient (DSC) being the most popular. The pooled results were 0.93 [0.93, 0.93] for DSC, 0.86 [0.85, 0.87] for Intersection over Union (IoU), 0.22 [0.19, 0.24] for Average Symmetric Surface Distance (ASSD), 0.92 [0.90, 0.94] for sensitivity, 0.71 [0.26, 1.17] for 95% Hausdorff distance, and 0.96 [0.93, 0.98] for precision. No significant difference was observed in the segmentation of single-rooted or multi-rooted teeth. No obvious correlation between sample size and segmentation performance was observed.

Conclusions: Multiple deep learning algorithms have been successfully applied to tooth segmentation from CT/CBCT and their evolution has been well summarized and categorized according to their backbone structures. In future, studies are needed with standardized protocols and open labelled datasets.

Keywords: Artificial intelligence; CBCT; Convolutional neural networks; Deep learning; Tooth segmentation; Transformer.

Publication types

  • Systematic Review
  • Meta-Analysis

MeSH terms

  • Cone-Beam Computed Tomography* / methods
  • Deep Learning*
  • Humans
  • Tomography, X-Ray Computed*
  • Tooth* / diagnostic imaging