YTHDF1 differentiates the contributing roles of mTORC1 in aging

Mol Cell. 2025 Jun 5;85(11):2194-2210.e8. doi: 10.1016/j.molcel.2025.05.003. Epub 2025 May 28.

Abstract

The mechanistic target of rapamycin (mTOR) serves as an essential hub in sensing metabolic stress and regulating aging, although the differential contributions of mTOR-regulated protein and cholesterol synthesis are unclear. Post-transcriptional modifications of mRNAs, such as N6-methyladenosine (m6A), occur rapidly in response to acute environmental changes to maintain tissue homeostasis. Here, we showed that loss of YTH m6A RNA-binding protein 1 (YTHDF1) accelerated murine aging. Mechanistically, YTHDF1 is anchored to the lysosome surface by lysosome-associated membrane protein (LAMP2), whereby it recruits tuberous sclerosis complex (TSC2) to inhibit mTOR complex 1 (mTORC1). Ythdf1 loss activated mTORC1-sterol regulatory element-binding protein 2 (SREBP2)-axis-mediated cholesterol biosynthesis but not m6A-reader-regulated protein translation. Rapamycin restored murine healthspan in contrast to the maximum lifespan shortening caused by Ythdf1 depletion. Our data reveal an m6A-independent function of YTHDF1, which differentiates the contributing roles of mTORC1 in the regulation of aging.

Keywords: SREBP2; TSC2; YTHDF1; aging; m6A; mTORC1; rapamycin.

MeSH terms

  • Adenosine / analogs & derivatives
  • Adenosine / metabolism
  • Aging* / genetics
  • Aging* / metabolism
  • Animals
  • Cholesterol / biosynthesis
  • Humans
  • Longevity
  • Lysosomes / metabolism
  • Male
  • Mechanistic Target of Rapamycin Complex 1* / genetics
  • Mechanistic Target of Rapamycin Complex 1* / metabolism
  • Mice
  • Mice, Inbred C57BL
  • Mice, Knockout
  • RNA-Binding Proteins* / genetics
  • RNA-Binding Proteins* / metabolism
  • Signal Transduction
  • Sirolimus / pharmacology
  • Tuberous Sclerosis Complex 2 Protein / genetics
  • Tuberous Sclerosis Complex 2 Protein / metabolism

Substances

  • Mechanistic Target of Rapamycin Complex 1
  • RNA-Binding Proteins
  • Ythdf1 protein, mouse
  • Tuberous Sclerosis Complex 2 Protein
  • Tsc2 protein, mouse
  • Cholesterol
  • Sirolimus
  • N-methyladenosine
  • Adenosine