Ichthyophthirius multifiliis (Ich) is a major pathogen responsible for high mortality rates in Takifugu fasciatus aquaculture. Despite its significance, the local and systemic immune responses of pufferfish to Ich infection remain poorly understood. Additionally, the interaction between ectoparasite infection and gut microbiota has not been thoroughly investigated. To address these gaps, we established an Ich infection model in pufferfish through bath administration. RT-PCR confirmed that Ich invades the skin, gill, and fin at 10 days post-infection (dpi) using 5000 theronts per fish. RT-qPCR analysis revealed immune responses in the spleen, liver, gill, skin, and gut following infection, while H&E staining identified Ich intrusion into the epidermal layer of the skin. RNA-seq analysis showed that pathways such as Th1 and Th2 cell differentiation, legionellosis, and Chagas disease were significantly enriched in the spleen, whereas ECM-receptor interaction, calcium signaling, and PI3K-Akt signaling pathways were enriched in the skin, suggesting that Ich breaches local defenses and activates systemic immune responses. Furthermore, Ich infection reduced the alpha diversity of the gut microbiota, with notable compositional shifts, including a decrease in commensals such as Chryseobacterium and an increase in opportunistic bacteria like Elizabethkingia. These findings enhance our understanding of the intricate interactions between parasite, host, and gut microbiota, providing insights into the immune and microbiome dynamics of Ich infection in pufferfish.
Keywords: Gut microbiome; Ichthyophthirius multifiliis; Takifugu fasciatus; Transcriptome.
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