In vitro morphological profiling of T cells predicts clinical response to natalizumab therapy in patients with multiple sclerosis

Nat Commun. 2025 Jul 1;16(1):5533. doi: 10.1038/s41467-025-60224-3.

Abstract

Despite the efficacy of natalizumab, which targets the integrin VLA-4, in treating multiple sclerosis (MS), approximately 35% patients with MS present evidence of disease activity two years after treatment initiation. Individual heterogeneity of leukocyte response to VLA-4 on natalizumab-mediated blockade may underlie disparities in treatment efficacy. Here we use a high-content cell imaging (HCI) pipeline to profile the in vitro effects of natalizumab on VLA-4-stimulated PBMCs from MS patients prior to natalizumab treatment. Unsupervised clustering of image data partially discriminates non-responder MS patients based on morphology, F-actin organization and signaling-related features in CD8+ T cells. Furthermore, through a random forest approach, treatment response can be predicted with a performance of 92% for a discovery cohort and 88% for a validation cohort. Unfavorable treatment response is associated with a distinct actin remodeling response of natalizumab-exposed CD8+ T cells and a residual ability of these cells to spread on VCAM-1. Our study thus unveils that CD8+ T cells from individual MS patients display heterogeneous susceptibility to natalizumab in vitro and highlights the potential of HCI-based pretreatment monitoring to assist individualized treatment prescription.

MeSH terms

  • Actins / metabolism
  • Adult
  • CD8-Positive T-Lymphocytes* / drug effects
  • CD8-Positive T-Lymphocytes* / immunology
  • CD8-Positive T-Lymphocytes* / metabolism
  • Female
  • Humans
  • Integrin alpha4beta1 / immunology
  • Integrin alpha4beta1 / metabolism
  • Male
  • Middle Aged
  • Multiple Sclerosis* / drug therapy
  • Multiple Sclerosis* / immunology
  • Natalizumab* / pharmacology
  • Natalizumab* / therapeutic use
  • Treatment Outcome
  • Vascular Cell Adhesion Molecule-1 / metabolism

Substances

  • Natalizumab
  • Vascular Cell Adhesion Molecule-1
  • Integrin alpha4beta1
  • Actins