Cytoplasmic PXR regulates glucose metabolism by binding mRNAs and modulating their stability

Nat Struct Mol Biol. 2025 Nov;32(11):2144-2157. doi: 10.1038/s41594-025-01614-5. Epub 2025 Aug 12.

Abstract

Pregnane X receptor (PXR) is a nuclear receptor considered to be a master transcription factor of xenobiotic metabolism. Here, using enhanced ultraviolet crosslinking and immunoprecipitation, we show that PXR can bind mRNAs in different cancer cell lines and normal liver tissues. PXR-bound mRNAs include genes related to metabolic reprogramming and lipid metabolism. Separately from its known nuclear transcriptional function, cytoplasmic PXR binds and stabilizes mature mRNA containing C+G-enriched sequences through its zinc-finger domain. Mechanistically, cytoplasmic PXR interacts with RNH1, an RNase inhibitor, to regulate RNA stability. In colorectal cancer cells, cytoplasmic PXR facilitates glucose uptake by stabilizing SLC2A1 mRNA. This process further promotes cell proliferation and cancer development. Our study unveils a previously unknown dimension of PXR-mediated gene regulation by characterizing PXR as an RNA-binding protein important for mRNA stability in the cytoplasm.

MeSH terms

  • Cell Line, Tumor
  • Cell Proliferation
  • Cytoplasm* / metabolism
  • Glucose Transporter Type 1 / genetics
  • Glucose Transporter Type 1 / metabolism
  • Glucose* / metabolism
  • Humans
  • Pregnane X Receptor* / metabolism
  • Protein Binding
  • RNA Stability*
  • RNA, Messenger* / genetics
  • RNA, Messenger* / metabolism
  • RNA-Binding Proteins / metabolism

Substances

  • Pregnane X Receptor
  • RNA, Messenger
  • Glucose
  • Glucose Transporter Type 1
  • SLC2A1 protein, human
  • RNA-Binding Proteins