Loss-of-function mutations in PLD4 lead to systemic lupus erythematosus

Nature. 2025 Nov;647(8089):498-505. doi: 10.1038/s41586-025-09513-x. Epub 2025 Sep 10.

Abstract

Monogenic lupus offers valuable insights into the underlying mechanisms and therapeutic approaches for systemic lupus erythematosus (SLE)1-3. Here we report on five patients with SLE carrying recessive mutations in phospholipase D family member 4 (PLD4). Deleterious variants in PLD4 resulted in impaired single-stranded nucleic acid exonuclease activity in in vitro and ex vivo assays. PLD4 loss-of-function mutations led to excessive activation of Toll-like receptor 7 (TLR7) and TLR9. Downstream inflammatory signalling pathways, especially type I interferon signalling, were hyperactivated in patient dendritic cells. Pld4-deficient mice presented with autoimmunity and cell-intrinsic expansion of plasmacytoid dendritic cells and plasma cells. Pld4-deficient mice responded to the JAK inhibitor baricitinib, suggesting that targeting type I interferon may be a potential therapy for patients with PLD4 deficiency.

MeSH terms

  • Adult
  • Animals
  • Autoimmunity / genetics
  • Azetidines / pharmacology
  • Azetidines / therapeutic use
  • Dendritic Cells / immunology
  • Dendritic Cells / metabolism
  • Female
  • Humans
  • Interferon Type I / immunology
  • Interferon Type I / metabolism
  • Loss of Function Mutation* / genetics
  • Lupus Erythematosus, Systemic* / drug therapy
  • Lupus Erythematosus, Systemic* / enzymology
  • Lupus Erythematosus, Systemic* / genetics
  • Lupus Erythematosus, Systemic* / immunology
  • Lupus Erythematosus, Systemic* / pathology
  • Male
  • Mice
  • Phospholipase D* / deficiency
  • Phospholipase D* / genetics
  • Phospholipase D* / metabolism
  • Purines / pharmacology
  • Purines / therapeutic use
  • Pyrazoles / pharmacology
  • Pyrazoles / therapeutic use
  • Signal Transduction
  • Sulfonamides / pharmacology
  • Sulfonamides / therapeutic use
  • Toll-Like Receptor 7 / immunology
  • Toll-Like Receptor 7 / metabolism
  • Toll-Like Receptor 9 / immunology
  • Toll-Like Receptor 9 / metabolism

Substances

  • Azetidines
  • baricitinib
  • Purines
  • Sulfonamides
  • Phospholipase D
  • Pyrazoles
  • Toll-Like Receptor 7
  • Toll-Like Receptor 9
  • Interferon Type I