Temporal control of human DNA replication licensing by CDK4/6-RB signalling and chemical genetics

Nat Commun. 2025 Sep 12;16(1):8268. doi: 10.1038/s41467-025-63669-8.

Abstract

Cyclin-dependent kinases (CDKs) coordinate DNA replication and cell division, and play key roles in tissue homeostasis, genome stability and cancer development. The first step in replication is origin licensing, when minichromosome maintenance (MCM) helicases are loaded onto DNA by CDC6, CDT1 and the origin recognition complex (ORC). In yeast, origin licensing starts when CDK activity plummets in G1 phase, reinforcing the view that CDKs inhibit licensing. Here we show that, in human cells, CDK4/6 activity promotes origin licensing. By combining rapid protein degradation and time-resolved EdU-sequencing, we find that CDK4/6 activity acts epistatically to CDC6 and CDT1 in G1 phase and counteracts RB pocket proteins to promote origin licensing. Therapeutic CDK4/6 inhibitors block MCM and ORC6 loading, which we exploit to trigger mitosis with unreplicated DNA in p53-deficient cells. The CDK4/6-RB axis thus links replication licensing to proliferation, which has implications for human cell fate control and cancer therapy design.

MeSH terms

  • Cell Cycle Proteins / genetics
  • Cell Cycle Proteins / metabolism
  • Cyclin-Dependent Kinase 4* / antagonists & inhibitors
  • Cyclin-Dependent Kinase 4* / genetics
  • Cyclin-Dependent Kinase 4* / metabolism
  • Cyclin-Dependent Kinase 6* / antagonists & inhibitors
  • Cyclin-Dependent Kinase 6* / genetics
  • Cyclin-Dependent Kinase 6* / metabolism
  • DNA Replication* / drug effects
  • DNA Replication* / genetics
  • G1 Phase
  • Humans
  • Minichromosome Maintenance Proteins / metabolism
  • Mitosis
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism
  • Origin Recognition Complex / genetics
  • Origin Recognition Complex / metabolism
  • Retinoblastoma Protein* / genetics
  • Retinoblastoma Protein* / metabolism
  • Signal Transduction

Substances

  • Cell Cycle Proteins
  • Cyclin-Dependent Kinase 4
  • Cyclin-Dependent Kinase 6
  • CDK6 protein, human
  • CDC6 protein, human
  • CDK4 protein, human
  • CDT1 protein, human
  • Retinoblastoma Protein
  • Origin Recognition Complex
  • Minichromosome Maintenance Proteins
  • Nuclear Proteins