Genetic crosses reveal genomic loci responsible for virulence in Cryptosporidium parvum infection

Cell Rep. 2025 Oct 28;44(10):116315. doi: 10.1016/j.celrep.2025.116315. Epub 2025 Sep 18.

Abstract

The relationship between parasite genotype and pathogenesis is largely unknown for Cryptosporidium, a leading cause of diarrheal disease in children. An array of parasites with similar genomes produces varied disease outcomes in different hosts. Here, we isolate and characterize Cryptosporidium parvum strains that show marked differences in virulence and persistence in mice. Taking advantage of the sexual life cycle of this eukaryotic pathogen, we use genetic crosses to discover the underlying chromosomal loci. Whole-genome sequencing and bulk segregant analysis of infection-selected progeny mapped three loci on chromosomes 2, 6, and 7 associated with the ability to colonize and persist in mice and the positions of drug resistance genes. The chromosome 6 locus encodes the hyper-polymorphic surface glycoprotein GP60. Reverse genetic studies in both parental strains demonstrate that GP60 controls parasite burden and virulence, but not persistence, and reveal the dominance of the less virulent allele, suggesting it restricts virulence.

Keywords: CP: Microbiology; Cryptosporidium parvum; GP60 glycoprotein; allelic replacement; bulk segregant analysis; dense granule proteins; genetic crosses; persistence; virulence.

MeSH terms

  • Animals
  • Crosses, Genetic
  • Cryptosporidiosis* / genetics
  • Cryptosporidiosis* / parasitology
  • Cryptosporidium parvum* / genetics
  • Cryptosporidium parvum* / pathogenicity
  • Female
  • Genetic Loci*
  • Genome, Protozoan
  • Humans
  • Mice
  • Virulence / genetics