Synthesis and biological evaluation of some pyrimidine derivatives as multifunctional ligands for the treatment of Alzheimer's disease

Bioorg Med Chem. 2026 Jan 1:132:118445. doi: 10.1016/j.bmc.2025.118445. Epub 2025 Oct 14.

Abstract

Alzheimer's disease (AD) is a neurodegenerative disorder and acetylcholinesterase (AChE), butyrylcholinesterase (BuChE), and sphingomyelinase (SMase) enzymes are among its therapeutic targets. In this study, a series of tetrahydropyrimidine and hexahydropyrimidine derivatives were synthesized and evaluated for their inhibition of Bacillus cereus SMase, electric eel AChE (EeAChE), and equine BuChE (eqBuChE) as potential agents against AD. Among the synthesized compounds, 4-oxo-6-(pyridin-2-yl)-2-thioxohexahydropyrimidine-5‑carbonitrile (compound 24) was found to be the most active compound against B. cereus SMase, with an IC50 value of 1.61 μM. In addition, 2-(benzylthio)-4-octyl-6-oxo-1,6-dihydropyrimidine-5‑carbonitrile (compound 14) and 4-octyl-6-oxo-2-(phenethylthio)-1,6-dihydropyrimidine-5‑carbonitrile (compound 16) exhibited selective eqBuChE inhibition with IC50 values of 3.68 and 1.65 μM, respectively. The mode of inhibition of the selected compounds was determined by enzyme kinetic study. These compounds were also examined for their metal-chelating properties with various biometals and effect of B. cereus-induced hemolysis on sheep erythrocytes. Additionally, compound 24 showed no cytotoxic effect on the HUVEC cell line at its IC50 concentration. The biological data were supported by the results of molecular docking studies, and in-silico physicochemical properties/ADME predictions of the selected compounds were determined.

Keywords: Alzheimer's disease; Anti-hemolytic activity; Bacillus cereus sphingomiyelinase; Cholinesterase; Metal chelation; Molecular docking.

MeSH terms

  • Acetylcholinesterase / metabolism
  • Alzheimer Disease* / drug therapy
  • Alzheimer Disease* / metabolism
  • Animals
  • Bacillus cereus / drug effects
  • Bacillus cereus / enzymology
  • Butyrylcholinesterase / metabolism
  • Cholinesterase Inhibitors* / chemical synthesis
  • Cholinesterase Inhibitors* / chemistry
  • Cholinesterase Inhibitors* / pharmacology
  • Dose-Response Relationship, Drug
  • Electrophorus
  • Horses
  • Humans
  • Ligands
  • Molecular Docking Simulation
  • Molecular Structure
  • Pyrimidines* / chemical synthesis
  • Pyrimidines* / chemistry
  • Pyrimidines* / pharmacology
  • Structure-Activity Relationship

Substances

  • Pyrimidines
  • Cholinesterase Inhibitors
  • Acetylcholinesterase
  • Butyrylcholinesterase
  • Ligands