TCR signaling via NFATc1 constrains IL-15-induced bystander activation of human memory CD8+ T cells

Immunity. 2025 Dec 9;58(12):2957-2971.e8. doi: 10.1016/j.immuni.2025.10.002. Epub 2025 Oct 31.

Abstract

Human memory CD8+ T cells can undergo T cell receptor (TCR)-independent activation by interleukin-15 (IL-15) in a bystander manner. Bystander-activated CD8+ T cells contribute to host tissue injury through natural killer (NK)-like cytotoxicity during viral infections. However, detailed mechanisms underlying IL-15-induced bystander activation remain to be elucidated. In this study, we investigated the molecular regulation of bystander activation and NK-like cytotoxicity of human CCR7- memory CD8+ T cells. We found that TCR signals suppressed characteristic features of IL-15-induced CD8+ T cell activation. Ionomycin also suppressed IL-15-induced expression of NKG2D and NK cytotoxicity genes, indicating that Ca2+-calcineurin signaling suppressed bystander activation. Mechanistically, NFATc1 bound to AP-1, limiting its ability to induce expression of NK cytotoxicity-related genes. We also defined an IL-15-induced bystander activation gene set, which was validated in bystander CD8+ T cells from patients with hepatitis A virus infection. Our findings open avenues for investigating bystander CD8+ T cell activation and its regulation in pathological conditions.

Keywords: Ca(2+)–calcineurin signaling; IL-15; NFATc1; TCR; bystander activation.

MeSH terms

  • Bystander Effect* / immunology
  • CD8-Positive T-Lymphocytes* / immunology
  • CD8-Positive T-Lymphocytes* / metabolism
  • Cytotoxicity, Immunologic
  • Humans
  • Immunologic Memory*
  • Interleukin-15* / immunology
  • Interleukin-15* / metabolism
  • Killer Cells, Natural / immunology
  • Lymphocyte Activation / immunology
  • Memory T Cells* / immunology
  • NFATC Transcription Factors* / immunology
  • NFATC Transcription Factors* / metabolism
  • NK Cell Lectin-Like Receptor Subfamily K / metabolism
  • Receptors, Antigen, T-Cell* / immunology
  • Receptors, Antigen, T-Cell* / metabolism
  • Signal Transduction / immunology

Substances

  • Interleukin-15
  • NFATC Transcription Factors
  • Receptors, Antigen, T-Cell
  • NFATC1 protein, human
  • IL15 protein, human
  • NK Cell Lectin-Like Receptor Subfamily K