Benchmarking porcine pancreatic ductal organoids for drug screening applications

EMBO Mol Med. 2025 Dec;17(12):3657-3688. doi: 10.1038/s44321-025-00330-3. Epub 2025 Nov 4.

Abstract

Primary human pancreatic ductal organoids (HPDO) have emerged as a model to study pancreas biology and model disease like pancreatitis and pancreatic cancer. Yet, donor material availability, genetic variability and a lack of extensive benchmarking to healthy and disease pancreas limits the range of applications. To address this gap, we established porcine pancreatic ductal organoids (PPDO) as a system from a reliable, genetically defined and easily obtainable source to model pancreatic ductal/progenitor biology. We benchmarked PPDO to HPDO and primary porcine pancreas using single-cell RNA sequencing (scRNA-Seq). We observed no overt phenotypic differences in PPDO derived from distinct developmental stages using extensive proteomics profiling, with a WNT/basal cell signaling enriched population characterizing PPDO. PPDO exhibited differentiation potential towards mature ductal cells and limited potential towards endocrine lineages. We used PPDO as a chemical screening platform to assess the safety of FDA-approved drugs and showed conserved toxicity of statins and α-adrenergic receptor inhibitors between PPDO and HPDO cultures. Overall, our results highlight the PPDO as a model for mammalian duct/progenitor applications.

Keywords: Chemical Screen; Cross-species Comparison; Omics Profile; Pancreatic Ductal Organoids; Porcine Pancreas; Proteome Profile; scRNA-Seq Profile.

MeSH terms

  • Animals
  • Benchmarking
  • Cell Differentiation
  • Drug Evaluation, Preclinical / methods
  • Humans
  • Organoids* / cytology
  • Organoids* / drug effects
  • Pancreas
  • Pancreatic Ducts* / cytology
  • Pancreatic Ducts* / drug effects
  • Proteomics
  • Single-Cell Analysis
  • Swine