Live-attenuated influenza virus vaccine strain with an engineered temperature-sensitive and genetically stable viral polymerase variant

J Virol. 2025 Dec 23;99(12):e0139025. doi: 10.1128/jvi.01390-25. Epub 2025 Nov 13.

Abstract

Vaccination against seasonal influenza is considered an effective means of reducing morbidity and mortality. Live-attenuated vaccines offer more protection against influenza than inactivated vaccines as they efficiently induce cellular immunity and provide cross-immunogenicity against various antigenic subtypes. For the production of safer live-attenuated vaccines, it is important to develop a common master donor vaccine strain in which pathogenic revertants are much less likely to appear. In this study, we introduced a single amino acid substitution of Lys471 into the PB1 polymerase subunit of influenza A virus and succeeded in isolating an attenuated mutant virus that exhibits a temperature-sensitive phenotype. The Lys471 residue is located in the polymerase motif D on PB1 and is positioned near the entrance tunnel domain for incoming nucleotide triphosphate. Although 10 viable PB1-Lys471 mutants did not proliferate at 37°C, their variants could replicate at 31°C and 34°C. Moreover, we found that PB1-Lys471Pro variant induces a genetically stable influenza virus phenotype; this mutant virus did not revert to wild-type phenotype from the temperature-sensitive phenotype by serial virus passages. Animal experiments have demonstrated that these PB1 mutant strains work effectively as live-attenuated vaccines. Application of the PB1-Lys471 substitution to a master donor strain is expected to lead to the development of a safer, high-performance, and widely used live-attenuated vaccine with the antigen of circulating influenza viruses.

Importance: Influenza virus elicits respiratory tract disease and is a threat to global human health. Vaccination is considered an effective tool for reducing the morbidity and mortality caused by influenza disease. The only licensed live-attenuated influenza vaccine that has been proven safe and effective is FluMist. In this study, we isolated an attenuated influenza mutant virus with a Lys471 single amino acid substitution in PB1, which displayed a temperature-sensitive and a low-pathogenicity phenotype. By applying the PB1-Lys471 substitution to the vaccine mother strain or the circulating influenza virus using reverse genetic technology, a high-performance and safe live-attenuated vaccine carrying the viral antigens of the vaccine-targeted strain can be developed.

Keywords: influenza virus; live-attenuated vaccine; reverse genetic analysis; temperature-sensitive phenotype; viral RNA polymerase.

MeSH terms

  • Amino Acid Substitution
  • Animals
  • Dogs
  • Female
  • Humans
  • Influenza A virus* / genetics
  • Influenza A virus* / immunology
  • Influenza Vaccines* / genetics
  • Influenza Vaccines* / immunology
  • Influenza, Human / immunology
  • Influenza, Human / prevention & control
  • Influenza, Human / virology
  • Madin Darby Canine Kidney Cells
  • Mice
  • Mice, Inbred BALB C
  • Mutation
  • Orthomyxoviridae Infections / immunology
  • Orthomyxoviridae Infections / prevention & control
  • Orthomyxoviridae Infections / virology
  • Temperature
  • Vaccines, Attenuated / genetics
  • Vaccines, Attenuated / immunology
  • Viral Proteins* / genetics
  • Viral Proteins* / immunology
  • Virus Replication

Substances

  • Influenza Vaccines
  • Vaccines, Attenuated
  • Viral Proteins
  • influenza virus polymerase basic protein 1