Direct detection of an NH-π hydrogen bond in an intrinsically disordered peptide

Nat Commun. 2025 Nov 20;16(1):10231. doi: 10.1038/s41467-025-66013-2.

Abstract

Hydrogen bonds play crucial roles in functional biomolecular dynamics. It is suggested that non-conventional hydrogen bonds engaging π electrons are prevalent in proteins. The experimental support for their existence is however limited. Here, we provide direct NMR spectroscopic evidence for the existence of an NH-π interaction in an intrinsically disordered peptide (E22G-Aβ40). In particular, we demonstrate the correlation between the amide proton of a glycine residue (Gly22) and the aromatic carbons of its preceding Phe20 through π hydrogen bond-mediated scalar coupling between them, as predicted by density functional theory calculations. Our results present a proof-of-principle example of NH-π interactions in an intrinsically disordered protein (IDP) and suggest the potential prevalence of π hydrogen bonds on the surface of IDPs. Direct experimental verification of NH-π interactions in folded proteins remains for future studies.

MeSH terms

  • Amyloid beta-Peptides* / chemistry
  • Glycine / chemistry
  • Hydrogen Bonding
  • Intrinsically Disordered Proteins* / chemistry
  • Magnetic Resonance Spectroscopy
  • Nuclear Magnetic Resonance, Biomolecular
  • Peptides* / chemistry
  • Protein Folding

Substances

  • Intrinsically Disordered Proteins
  • Peptides
  • Glycine
  • Amyloid beta-Peptides