Revealing neurocognitive and behavioral patterns through unsupervised manifold learning of dynamic brain data

Nat Comput Sci. 2025 Dec;5(12):1238-1252. doi: 10.1038/s43588-025-00911-9. Epub 2025 Dec 4.

Abstract

Dynamic brain data are becoming increasingly accessible, providing a gateway to understanding the inner workings of the brain in living participants. However, the size and complexity of the data pose a challenge in extracting meaningful information across various data sources. Here we introduce a generalizable unsupervised deep manifold learning for exploration of neurocognitive and behavioral patterns. Unlike existing methods that extract patterns directly from the input data, the proposed brain-dynamic convolutional-network-based embedding (BCNE) captures brain-state trajectories by analyzing temporospatial correlations within the data and applying manifold learning. The results demonstrate that BCNE effectively delineates scene transitions, underscores the involvement of different brain regions in memory and narrative processing, distinguishes dynamic learning processes and identifies differences between active and passive behaviors. BCNE provides an effective tool for exploring general neuroscience inquiries or individual-specific patterns.

MeSH terms

  • Adult
  • Behavior* / physiology
  • Brain* / diagnostic imaging
  • Brain* / physiology
  • Cognition* / physiology
  • Deep Learning
  • Female
  • Humans
  • Magnetic Resonance Imaging
  • Male
  • Neural Networks, Computer
  • Unsupervised Machine Learning*