A comparative review of vector insertion techniques in Saccharomyces cerevisiae

J Microbiol Methods. 2026 Feb:241:107378. doi: 10.1016/j.mimet.2025.107378. Epub 2025 Dec 21.

Abstract

Saccharomyces cerevisiae, a model organism in genetics and molecular biology has been extensively engineered using various vector insertion techniques. This review compares and contrasts three prominent techniques: In vivo homologous recombination (HR), Cre-lox recombination and CRISPR/Cas9. In vivo HR leverages the organism's innate DNA repair machinery for easy vector integration and targeted genome modifications. Cre-lox recombination offers high specificity and efficiency at loxP sites, making it ideal for targeted gene excision or integration. CRISPR/Cas9 has revolutionized genome engineering with its precision and ability to target multiple loci simultaneously. Each technique has its strengths and limitations, including site dependency, off-target effects, and strain-specific variability. This review provides a comprehensive overview of these vector insertion techniques, highlighting their applications, advantages, and limitations in S. cerevisiae genome engineering and synthetic biology.

Keywords: CRISPR/Cas9; Cre-lox recombination; Homology directed repair; In vivo homologous recombination; Saccharomyces cerevisiae; Vector insertion.

Publication types

  • Review

MeSH terms

  • CRISPR-Cas Systems
  • Gene Editing / methods
  • Genetic Engineering* / methods
  • Genetic Vectors* / genetics
  • Genome, Fungal
  • Homologous Recombination
  • Mutagenesis, Insertional* / methods
  • Saccharomyces cerevisiae* / genetics
  • Synthetic Biology / methods