Impact of vector copy number on critical quality attributes of retrovirally engineered T cells

Mol Ther. 2026 Apr 1;34(4):1954-1962. doi: 10.1016/j.ymthe.2025.12.048. Epub 2025 Dec 24.

Abstract

Genetically engineered T cell therapies are approved by the FDA for the treatment of various cancers. The cell products in these treatments are manufactured using retroviral vectors to insert an antigen-targeting receptor into the T cell genome. Limited data exist on how vector copy number (VCN) per transduced cell impacts critical quality attributes (CQAs) of retrovirally engineered T cell products. We investigated the effect of VCN on the purity and potency of E7 T cells, a T cell receptor (TCR)-engineered cell product that has shown safety and clinical activity in human papillomavirus (HPV)-associated cancers. An increased VCN correlated with enhanced functional characteristics, including transduction efficiency, tumor recognition as measured by IFN-γ production, and cytotoxic activity in real-time killing assays. We then analyzed archived retention vials from E7 T cell products from a clinical trial prior to FDA guidance on VCN limits. The median VCN was >5, and there were no cases of insertional oncogenesis. These findings demonstrate a positive correlation between VCN and improved cell product purity and potency and contribute to existing clinical data showing a low risk of insertional oncogenesis in retrovirally engineered T cell therapies.

Keywords: CAR T cell therapy; T cell receptor-T cell therapy; TCR-T cell therapy; VCN; adoptive T cell therapy; cell manufacturing; chimeric antigen receptor T cell therapy; secondary malignancy; vector copy number.

MeSH terms

  • Gene Dosage*
  • Genetic Vectors* / genetics
  • Humans
  • Immunotherapy, Adoptive / methods
  • Receptors, Antigen, T-Cell / genetics
  • Receptors, Antigen, T-Cell / metabolism
  • Retroviridae* / genetics
  • T-Lymphocytes* / immunology
  • T-Lymphocytes* / metabolism
  • Transduction, Genetic

Substances

  • Receptors, Antigen, T-Cell