Emergence of antibiotic-resistant pneumococcal serotypes causing invasive pneumococcal disease in children, Spain

Antimicrob Agents Chemother. 2026 Feb 4;70(2):e0153025. doi: 10.1128/aac.01530-25. Epub 2025 Dec 31.

Abstract

Pneumococcal conjugate vaccines (PCVs) have significantly reduced disease burden caused by Streptococcus pneumoniae, a leading cause of childhood morbidity and mortality globally. The rise of non-vaccine serotypes is a frequent phenomenon after the use of these PCVs. This study is a national surveillance that includes all pneumococcal isolates causing invasive pneumococcal disease (IPD) (4,455 isolates) in the pediatric population to analyze the changes of strains with reduced susceptibility (IPD-RS) to different antibiotics (1,458 to penicillin/1,304 to erythromycin) and the impact of PCVs and COVID-19 pandemic on antibiotic resistance. Six periods are differentiated according to this decline: pre-PCV13, early PCV13, middle PCV13, late PCV13, COVID-19, and reopening. Between 2009 and 2023, overall IPD cases in Spain decreased by over 60% in children aged 1-4 years and by approximately 50% in infants under 1 year of age. Nevertheless, an increase in IPD-RS caused by non-PCV13 serotypes was observed, with serotype 24F being the most prevalent, which is not included in the currently licensed PCVs. The introduction of PCV13 showed a substantial impact on reducing IPD in children. The COVID-19 pandemic led to a temporary decline in the burden of disease caused by resistant strains in 2020 due to non-pharmacological measures followed by a subsequent recovery.

Keywords: invasive pneumococcal diseases; pneumococcal conjugated vaccine; resistant antibiotics; serotype replacement.

MeSH terms

  • Anti-Bacterial Agents* / pharmacology
  • Anti-Bacterial Agents* / therapeutic use
  • COVID-19 / epidemiology
  • COVID-19 / virology
  • Child
  • Child, Preschool
  • Drug Resistance, Bacterial*
  • Erythromycin / pharmacology
  • Erythromycin / therapeutic use
  • Female
  • Humans
  • Infant
  • Male
  • Microbial Sensitivity Tests
  • Penicillins / pharmacology
  • Pneumococcal Infections* / drug therapy
  • Pneumococcal Infections* / epidemiology
  • Pneumococcal Infections* / microbiology
  • Pneumococcal Infections* / prevention & control
  • Pneumococcal Vaccines / immunology
  • Pneumococcal Vaccines / therapeutic use
  • SARS-CoV-2
  • Serogroup
  • Spain / epidemiology
  • Streptococcus pneumoniae* / drug effects
  • Streptococcus pneumoniae* / isolation & purification

Substances

  • Anti-Bacterial Agents
  • Pneumococcal Vaccines
  • 13-valent pneumococcal vaccine
  • Erythromycin
  • Penicillins