PTPN1 Regulation via YBX1-PTBP1 Interaction Promotes Fibroblast Activation and Fibrotic Remodeling in the Lung

Int J Biol Sci. 2026 Jan 30;22(5):2233-2246. doi: 10.7150/ijbs.123875. eCollection 2026.

Abstract

Idiopathic pulmonary fibrosis (IPF) is a chronic, progressive interstitial pneumonia of unknown etiology. Its pathogenesis involves complex multicellular interactions and signaling pathways, with fibroblast-to-myofibroblast transition (FMT) being critical for fibrogenesis. Although the transcription factor Y-box binding protein 1 (YBX1) regulates processes such as cell proliferation, transcription, translation, and DNA repair, its role in IPF remains undefined. Here, we demonstrate that YBX1 overexpression significantly promotes transforming growth factor-β1 (TGF-β1)-induced pulmonary FMT, leading to substantially increased extracellular matrix (ECM) deposition in primary human (PHLFs) and mouse (PMLFs) lung fibroblasts. Conversely, YBX1 inhibition markedly suppresses TGF-β1-driven aberrant fibroblast migration and activation. Mechanistically, YBX1 interacts with polypyrimidine tract-binding protein 1 (PTBP1) and binds to the protein tyrosine phosphatase nonreceptor type 1 (PTPN1) promoter to transcriptionally regulate PTPN1, thereby driving FMT. In vivo, intratracheal delivery of Ybx1-targeting shRNA via adeno-associated virus (AAV) robustly attenuates ECM deposition, hydroxyproline content, and fibrotic marker expression in a bleomycin (BLM)-induced murine fibrosis model. Our findings identify YBX1 as a promoter of lung FMT via the PTBP1/PTPN1 axis, offering mechanistic insights for the development of YBX1-targeted therapeutic strategies for IPF.

Keywords: PTPN1; YBX1; YBX1-PTBP1 interaction; fibroblast activation.

MeSH terms

  • Animals
  • Extracellular Matrix / metabolism
  • Fibroblasts* / metabolism
  • Heterogeneous-Nuclear Ribonucleoproteins* / genetics
  • Heterogeneous-Nuclear Ribonucleoproteins* / metabolism
  • Humans
  • Idiopathic Pulmonary Fibrosis / metabolism
  • Lung* / metabolism
  • Lung* / pathology
  • Male
  • Mice
  • Mice, Inbred C57BL
  • Polypyrimidine Tract-Binding Protein* / genetics
  • Polypyrimidine Tract-Binding Protein* / metabolism
  • Transforming Growth Factor beta1 / metabolism
  • Y-Box-Binding Protein 1* / genetics
  • Y-Box-Binding Protein 1* / metabolism

Substances

  • Y-Box-Binding Protein 1
  • YBX1 protein, human
  • Polypyrimidine Tract-Binding Protein
  • Heterogeneous-Nuclear Ribonucleoproteins
  • Transforming Growth Factor beta1
  • PTBP1 protein, human