Ciprofloxacin exposure impairs neurogenesis and E/I balance in human cortical organoids

Neuropharmacology. 2026 Jul 1:292:110931. doi: 10.1016/j.neuropharm.2026.110931. Epub 2026 Mar 25.

Abstract

Ciprofloxacin (CPFX) is a widely used broad-spectrum fluoroquinolone antibiotic. Although its neurotoxic potential in the mature brain has been recognized, its impact on the developing human nervous system remains largely unexplored. Given that the developing brain exhibits heightened vulnerability to environmental and pharmacological insults, we investigated the developmental neurotoxicity of CPFX using human cortical organoids (hCOs) that recapitulate key features of early cortical development. In this study, chronic low-dose CPFX exposure over two weeks induces significant mitochondrial dysfunction, characterized by excessive ROS production and decreased mitochondrial membrane potential (MMP). These mitochondrial impairments were accompanied by alterations in cortical development and disruptions in GABAergic network formation. Mechanistically, CPFX exposure significantly downregulated Forkhead box G1 (FOXG1) expression in hCOs. Molecular docking simulations suggested an interaction of CPFX with the functional domain of FOXG1. Furthermore, FOXG1 knockdown in primary mouse neurons mimicked CPFX-induced mitochondrial hyperactivity and metabolic dysregulation. Microelectrode array analyses revealed aberrant neuronal firing patterns consistent with an epileptiform phenotype. Importantly, aspirin significantly alleviated CPFX-induced mitochondrial dysfunction, restored ATP and ROS levels, and stabilized neuronal electrophysiological activity in primary neurons, underscoring its potential as a therapeutic intervention. Overall, CPFX induces a broad neuropathological phenotype and impair both mitochondrial function and neurogenesis in hCOs, potentially through a mechanism mediated by FOXG1 disruption. These findings offer novel insights into CPFX-induced neurotoxicity and imply FOXG1 as a promising intervention target.

Keywords: Ciprofloxacin (CPFX); Excitatory/inhibitory balance; Forkhead box G1 (FOXG1); Human cortical organoids (hCOs); Neurotoxicity.

MeSH terms

  • Animals
  • Anti-Bacterial Agents* / toxicity
  • Cells, Cultured
  • Cerebral Cortex* / drug effects
  • Cerebral Cortex* / growth & development
  • Cerebral Cortex* / metabolism
  • Ciprofloxacin* / toxicity
  • Female
  • Forkhead Transcription Factors / genetics
  • Forkhead Transcription Factors / metabolism
  • Humans
  • Membrane Potential, Mitochondrial / drug effects
  • Mice
  • Mitochondria / drug effects
  • Mitochondria / metabolism
  • Nerve Tissue Proteins / genetics
  • Nerve Tissue Proteins / metabolism
  • Neurogenesis* / drug effects
  • Neurogenesis* / physiology
  • Neurons / drug effects
  • Neurons / metabolism
  • Organoids* / drug effects
  • Organoids* / metabolism
  • Reactive Oxygen Species / metabolism

Substances

  • Ciprofloxacin
  • Forkhead Transcription Factors
  • FOXG1 protein, human
  • Nerve Tissue Proteins
  • Reactive Oxygen Species
  • Anti-Bacterial Agents