Diverse paths to broadly neutralizing antibody escape among HIV-1 strains

Nat Microbiol. 2026 Jun;11(6):1573-1584. doi: 10.1038/s41564-026-02347-x. Epub 2026 May 11.

Abstract

Broadly neutralizing antibodies (bnAbs) are promising agents for HIV-1 treatment and prevention. However, the genetic barriers and mutational pathways to viral resistance, which can limit therapeutic antibody utility, remain poorly defined. Here we developed a medium-to-high throughput approach to determine the mutations that confer resistance to neutralization by the bnAbs 3BNC117 and 10-1074 currently in clinical development. We performed 7,776 parallel selection experiments to identify bnAb resistance mutations in 15 primary isolates that span global HIV-1 genetic diversity. There was substantial variability among HIV-1 isolates in the identity of mutations that conferred bnAb resistance. For 12 of 15 HIV-1 isolates, single amino acid changes could increase bnAb IC80 to >10 μg ml-1. Some 3BNC117 resistance mutations conferred resistance to additional bnAbs targeting the same or different epitopes, and unconventional escape mechanisms were occasionally encountered. These data provide a rationale for selecting bnAb combinations that are most likely to achieve treatment success.

MeSH terms

  • Antibodies, Monoclonal, Humanized
  • Antibodies, Neutralizing* / immunology
  • Broadly Neutralizing Antibodies
  • Drug Resistance, Viral / genetics
  • Epitopes / immunology
  • Genetic Variation
  • HIV Antibodies* / immunology
  • HIV Infections* / immunology
  • HIV Infections* / virology
  • HIV-1* / genetics
  • HIV-1* / immunology
  • HIV-1* / isolation & purification
  • Humans
  • Immune Evasion*
  • Mutation

Substances

  • Antibodies, Neutralizing
  • HIV Antibodies
  • 3BNC117 antibody
  • Epitopes
  • Broadly Neutralizing Antibodies
  • Antibodies, Monoclonal, Humanized