Description of OXA-244 carbapenemase-producing Escherichia coli in farm animals in The Netherlands, 2024

J Antimicrob Chemother. 2026 May 5;81(6):dkag155. doi: 10.1093/jac/dkag155.

Abstract

Background: To minimize the risk of livestock becoming a reservoir of carbapenemase-producing Enterobacterales (CPE), it is prohibited to use carbapenems in food-producing animals in Europe. Nonetheless, CPE have been detected in several EU countries in pigs, poultry and cattle.

Objectives: To detect and characterize CPE from farm animals in the Netherlands obtained within the European monitoring programme for antimicrobial resistance in animals and food.

Methods: Caecal samples from livestock animals are screened for the presence of CPE according to the recommended EURL-AR protocol and supplementary molecular screening. WGS was used to further study the isolates and compare with human-derived CPE.

Results: In 2024, two CPE isolates were detected in caecal samples from a pig and a broiler. Both were Escherichia coli producing OXA-244 and showed reduced susceptibility to meropenem, imipenem and ertapenem. WGS confirmed the presence of blaOXA-244 gene on a chromosomally located IS-element. Although both isolates belonged to ST58 and were genetically similar, neither represented a clonal relationship with each other, nor with human-associated OXA-244-producing E. coli from national CPE surveillance. Follow-up investigations on both farms did not reveal additional CPE.

Conclusions: The finding of two OXA-244-producing E. coli isolates in livestock caecal samples demonstrates the added value of implementing a more sensitive screening method for detection of CPE with low-level resistance to carbapenems in the European AMR monitoring programme for animals and food.

MeSH terms

  • Animals
  • Animals, Domestic / microbiology
  • Anti-Bacterial Agents / pharmacology
  • Bacterial Proteins* / genetics
  • Carbapenem-Resistant Enterobacteriaceae / genetics
  • Cattle
  • Cecum / microbiology
  • Chickens / microbiology
  • Escherichia coli Infections* / epidemiology
  • Escherichia coli Infections* / microbiology
  • Escherichia coli Infections* / veterinary
  • Escherichia coli* / drug effects
  • Escherichia coli* / enzymology
  • Escherichia coli* / genetics
  • Escherichia coli* / isolation & purification
  • Humans
  • Livestock* / microbiology
  • Microbial Sensitivity Tests
  • Netherlands / epidemiology
  • Swine
  • Whole Genome Sequencing
  • beta-Lactamases* / genetics

Substances

  • beta-Lactamases
  • Anti-Bacterial Agents
  • Bacterial Proteins
  • carbapenemase