Mechanism of D-cycloserine action: alanine racemase from Escherichia coli W

J Bacteriol. 1972 Jun;110(3):978-87. doi: 10.1128/jb.110.3.978-987.1972.

Abstract

The antibiotic d-cycloserine is an effective inhibitor of alanine racemase. The lack of inhibition by l-cycloserine of alanine racemase from Staphylococcus aureus led Roze and Strominger to formulate the cycloserine hypothesis. This hypothesis states that d-cycloserine has the conformation required of the substrates on the enzyme surface and that l-cycloserine cannot have this conformation. Alanine racemase from Escherichia coli W has been examined to establish whether these observations are a general feature of all alanine racemases. The enzyme (molecular weight = 95,000) has Michaelis-Menten constants of 4.6 x 10(-4)m and 9.7 x 10(-4)m for d- and l-alanine, respectively. The ratio of V(max) in the d- to l-direction is 2.3. The equilibrium constant calculated from the Haldane relationship is 1.11 +/- 0.15. Both d- and l-cycloserine are competitive inhibitors with constants (K(i)) of 6.5 x 10(-4)m and 2.1 x 10(-3)m, respectively. The ratio of K(m)d-alanine to K(i)d-cycloserine is 0.71, and the ratio of K(m)l-alanine to K(i)l-cycloserine is 0.46. Since l-cycloserine is an effective inhibitor, it is concluded that the cycloserine hypothesis does not apply to the enzyme from E. coli W.

MeSH terms

  • Alanine / metabolism
  • Ammonium Sulfate
  • Butanols
  • Carbon Isotopes
  • Cell Fractionation
  • Cell-Free System
  • Centrifugation, Density Gradient
  • Chemical Precipitation
  • Chromatography, Gel
  • Chromatography, Ion Exchange
  • Cycloserine / pharmacology*
  • Electrophoresis, Disc
  • Escherichia coli / enzymology*
  • Escherichia coli / growth & development
  • Hydrogen-Ion Concentration
  • Isomerases / antagonists & inhibitors*
  • Isomerases / isolation & purification
  • Isomerases / metabolism
  • Molecular Weight
  • Protamines
  • Stereoisomerism
  • Sucrose
  • Sulfates

Substances

  • Butanols
  • Carbon Isotopes
  • Protamines
  • Sulfates
  • Sucrose
  • Cycloserine
  • Isomerases
  • Alanine
  • Ammonium Sulfate