Thermodynamics of (dG--dC)3 double-helix formation in water and deuterium oxide

Biochemistry. 1981 Mar 17;20(6):1409-13. doi: 10.1021/bi00509a001.

Abstract

The thermodynamics of double-helix formation by (dG-dC)3 in H2O and D2O were measured spectrophotometrically and calorimetrically. Spectrophotometric values based on plots of inverse melting temperature vs. log of concentration are in good agreement with calorimetry. However, spectrophotometric values based on the shape of absorbance vs. temperature curves are in good agreement with calorimetry only if linear pre- and posttransition base lines are subtracted before analysis. The averages of the enthalpies measured by the three most reliable spectroscopic methods are -56.9 and -62.7 kcal/mol of helix in H2O and D2O, respectively. The corresponding calorimetric values are -59.6 and -65.8 kcal/mol of helix.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Calorimetry, Differential Scanning
  • Deuterium Oxide
  • Deuterium*
  • Nucleic Acid Conformation*
  • Oligodeoxyribonucleotides*
  • Oligonucleotides*
  • Spectrum Analysis
  • Thermodynamics
  • Water*

Substances

  • Oligodeoxyribonucleotides
  • Oligonucleotides
  • Water
  • tri-(deoxyguanylic acid-deoxycytidylic acid)
  • Deuterium
  • Deuterium Oxide