Completion of the amino acid sequences of the A and B chains of subcomponent C1q of the first component of human complement

Biochem J. 1982 Jun 1;203(3):559-69. doi: 10.1042/bj2030559.

Abstract

The sequences of amino acid residues 109--224 of the A chain, and residues 109--22 of the B chain, of human subcomponent C1q are given. These results, along with previously published sequence data on the N-terminal, collagen-like, regions of the A and B chains [Reid (1979) Biochem. J. 179, 367--371] yield the complete amino acid sequences of the A and B chains of subcomponent C1q. The asparagine residue at position A-124 has been identified as the major site of asparagine-linked carbohydrate in subcomponent C1q. When the sequences of the C-terminal, 135-residue-long, 'globular' regions of A and B chains are compared they show 40% homology. The degree of homology over certain stretches of 15--20 residues, within the C-terminal regions, rises up to values of 73%, indicating the presence of strongly conserved structures. Structure prediction studies indicate that both the A and B chain C-terminal regions may adopt a predominantly beta-type structure with apparently little alpha-helical structure.

MeSH terms

  • Amino Acid Sequence
  • Amino Acids / analysis
  • Asparagine / analysis
  • Carbohydrates / analysis
  • Complement Activating Enzymes*
  • Complement C1q
  • Humans
  • Peptide Fragments / isolation & purification

Substances

  • Amino Acids
  • Carbohydrates
  • Peptide Fragments
  • Asparagine
  • Complement C1q
  • Complement Activating Enzymes