Analysis and prediction of protein beta-sheet structures by a combinatorial approach

Nature. 1980 Jun 5;285(5764):378-82. doi: 10.1038/285378a0.

Abstract

Analysis of beta-sheet sandwiches (for example immunoglobulin domains) suggests an algorithm that successfully predicts the tertiary fold of these proteins from their sequence and secondary structure. We propose tertiary structures for beta 2-microglobulin and an HLA-B7 antigen fragment. Topological rules are presented that markedly reduce the number of folds for proteins in which a-helices pack against a parallel beta-sheet.

MeSH terms

  • Biological Evolution
  • Computers
  • HLA Antigens*
  • Humans
  • Hydrogen Bonding
  • Macromolecular Substances
  • Models, Theoretical
  • Protein Conformation*
  • Solubility
  • Structure-Activity Relationship
  • Thermodynamics
  • beta 2-Microglobulin

Substances

  • HLA Antigens
  • Macromolecular Substances
  • beta 2-Microglobulin