High-salt d(CpGpCpG), a left-handed Z' DNA double helix

Nature. 1980 Aug 7;286(5773):567-73. doi: 10.1038/286567a0.

Abstract

The DNA tetramer d(CpGpCpG) or CGCG crystallizes from high-salt solution as a left-handed double helix, the Z' helix. Its structure differs from that of the other known left-handed helix, Z-DNA, by a Cl'-exo sugar pucker at deoxyguanosines rather than C3'-endo, and these represent two alternative solutions to the same steric constraint arising from the syn glycosyl bond orientation. The apparent molecular basis for the Z to Z' transition in going from intermediate to high salt is substitution of a bound anion for water at guanine amino groups, and consequent charge repulsion of anions and backbone phosphates.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alcohols
  • Base Sequence
  • Binding Sites
  • Chemical Phenomena
  • Chemistry, Physical
  • DNA*
  • Ions
  • Models, Molecular
  • Nucleic Acid Conformation*
  • Oligodeoxyribonucleotides
  • Salts
  • Water

Substances

  • Alcohols
  • Ions
  • Oligodeoxyribonucleotides
  • Salts
  • Water
  • DNA