Structure-based design of a lysozyme with altered catalytic activity

Nat Struct Biol. 1995 Nov;2(11):1007-11. doi: 10.1038/nsb1195-1007.

Abstract

Here we show that the substitution Thr 26-->His in the active site of T4 lysozyme causes the product to change from the alpha- to the beta-anomer. This implies an alteration in the catalytic mechanism of the enzyme. From the change in product, together with inspection of relevant crystal structures, it is inferred that wild-type T4 lysozyme is an anomer-inverting enzyme with a single displacement mechanism in which water attacks from the alpha-side of the substrate. In contrast, the mutant T26H is an anomer-retaining enzyme with an apparently double displacement mechanism in which a water molecule attacks from the opposite side of the substrate. The results also show that the mechanism of wild-type T4 lysozyme differs from that of hen egg-white lysozyme even though both enzymes are presumed to have evolved from a common precursor.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Binding Sites / genetics
  • Biological Evolution
  • Carbohydrate Sequence
  • Catalysis
  • Crystallography
  • Egg White
  • Glycoside Hydrolases / genetics
  • Glycoside Hydrolases / metabolism
  • Hydrolysis
  • Models, Molecular
  • Molecular Sequence Data
  • Muramidase / genetics
  • Muramidase / metabolism*
  • Mutation
  • Protein Engineering*
  • Stereoisomerism
  • Structure-Activity Relationship

Substances

  • Glycoside Hydrolases
  • Muramidase