Evidence for sodium dodecyl sulfate/protein complexes adopting a necklace structure

Eur J Biochem. 1995 Sep 15;232(3):818-24.

Abstract

Structural analysis by cryo-electron microscopy and small-angle X-ray scattering of ten sodium dodecyl sulfate/protein complexes in 25 mM Tris/HCl, 0.192 M glycine, pH 8.3, showed necklace-like structures of spherical micelles dispersed along the unfolded peptide chain. The micelles of most SDS/protein complexes had a constant diameter (approximately 6.2 nm), slightly larger than pure SDS micelles (approximately 5.7 nm), all micelles possessing a degree of surface roughness. The micelle-associated polypeptide is mostly situated at the interface of the sulfate head groups and hydrocarbon core, intruding into the core rather than outward from the surface. Proteins with a molecular mass less than about 20 kDa formed complexes with a single SDS micelle. Multi-micellar SDS/protein complexes had centre-to-centre intermicellar distances in the range 7.0-12.0 nm. Our findings on the constancy of micellar size, number of micelles/complex, and the relationship between the degree of occupancy of micelles and a polypeptide's molecular mass, have enabled us to speculate on the correlation between the electrophoretic mobility of a polypeptide in SDS/PAGE and its molecular mass. The anomalous electrophoretic behaviour observed for the sodium dodecyl sulfate/histone H5 complex is accounted for by the large micelle of its complex.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Freezing
  • Microscopy, Electron / methods
  • Models, Chemical
  • Molecular Weight
  • Proteins / chemistry*
  • Scattering, Radiation
  • Sodium Dodecyl Sulfate / chemistry*
  • Solutions
  • X-Rays

Substances

  • Proteins
  • Solutions
  • Sodium Dodecyl Sulfate