Protein dynamics studied by rotating frame 15N spin relaxation times

J Biomol NMR. 1993 Mar;3(2):151-64. doi: 10.1007/BF00178259.

Abstract

Conformational rate processes in aqueous solutions of uniformly 15N-labeled pancreatic trypsin inhibitor (BPTI) at 36 degrees C were investigated by measuring the rotating frame relaxation times of the backbone 15N spins as a function of the spin-lock power. Two different intramolecular exchange processes were identified. A first local rate process involved the residues Cys38 and Arg39, had a correlation time of about 1.3 ms, and was related to isomerization of the chirality of the disulfide bond Cys14-Cys38. A second, faster motional mode was superimposed on the disulfide bond isomerization and was tentatively attributed to local segmental motions in the polypeptide sequence -Cys14-Ala15-Lys16-. The correlation time for the overall rotational tumbling of the protein was found to be 2 ns, using the assumption that relaxation is dominated by dipolar coupling and chemical shift anisotropy modulated by isotropic molecular reorientation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Aprotinin / chemistry*
  • Cattle
  • Magnetic Resonance Spectroscopy*
  • Molecular Sequence Data
  • Protein Conformation
  • Rotation
  • Solutions
  • Time Factors

Substances

  • Solutions
  • Aprotinin