Prediction of an HLA B8-restricted influenza epitope by motif

Immunology. 1993 May;79(1):171-3.

Abstract

Alignment of previously identified HLA B8-restricted cytotoxic T-cell (CTL) epitopes revealed a common motif: x, x, K/R, x, R/K, x, W/Y, x, I/L. Of five motif-conforming peptides tested, ELRSRYWAI was found to represent a new epitope from influenza nucleoprotein (NP). High concentrations of some peptides gave cross-reactive stimulation illustrating the requirement to confirm epitope assignment with recombinant vaccinias and highlighting a potential problem of peptide-based CTL vaccines.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Antigens, Viral / analysis*
  • Dose-Response Relationship, Immunologic
  • Epitopes / analysis*
  • HLA-B8 Antigen / analysis*
  • Humans
  • Molecular Sequence Data
  • Nucleocapsid Proteins
  • Nucleoproteins / immunology*
  • RNA-Binding Proteins*
  • Sequence Homology, Amino Acid
  • T-Lymphocytes, Cytotoxic / immunology*
  • Viral Core Proteins / immunology*
  • Viral Vaccines / immunology

Substances

  • Antigens, Viral
  • Epitopes
  • HLA-B8 Antigen
  • NP protein, Influenza A virus
  • Nucleocapsid Proteins
  • Nucleoproteins
  • RNA-Binding Proteins
  • Viral Core Proteins
  • Viral Vaccines