Promoter opening (melting) and transcription initiation by RNA polymerase I requires neither nucleotide beta,gamma hydrolysis nor protein phosphorylation
- PMID: 7688114
- PMCID: PMC309760
- DOI: 10.1093/nar/21.14.3233
Promoter opening (melting) and transcription initiation by RNA polymerase I requires neither nucleotide beta,gamma hydrolysis nor protein phosphorylation
Abstract
With some bacterial RNA polymerases and in eukaryotic RNA polymerase II, DNA melting during initiation requires the coupling of energy derived from beta,gamma hydrolysis of ATP. A detailed analysis of this possible requirement for eukaryotic RNA polymerase I reveals no such requirement. However, in some cases, beta,gamma non-hydrolyzable derivatives (beta,gamma imido or methylene) of nucleotide substrates have been found to significantly inhibit transcription initiation because of their inefficient use as the first nucleotide of the transcript. In addition, the results presented here show that protein kinase activity is not required as an integral part of transcription initiation by RNA polymerase I. Prior phosphorylation of proteins participating in the process is not ruled out.
Similar articles
-
DNA melting and promoter clearance by eukaryotic RNA polymerase I.J Mol Biol. 2000 May 26;299(1):75-89. doi: 10.1006/jmbi.2000.3743. J Mol Biol. 2000. PMID: 10860723
-
Initiation and regulation mechanisms of ribosomal RNA transcription in the eukaryote Acanthamoeba castellanii.Mol Cell Biochem. 1991 May 29-Jun 12;104(1-2):119-26. doi: 10.1007/BF00229811. Mol Cell Biochem. 1991. PMID: 1921990 Review.
-
ATP activates transcription initiation from promoters by RNA polymerase II in a reversible step prior to RNA synthesis.J Biol Chem. 1988 Feb 25;263(6):2962-8. J Biol Chem. 1988. PMID: 2449431
-
In vitro studies of transcript initiation by Escherichia coli RNA polymerase. 1. RNA chain initiation, abortive initiation, and promoter escape at three bacteriophage promoters.Biochemistry. 2003 Apr 8;42(13):3777-86. doi: 10.1021/bi026954e. Biochemistry. 2003. PMID: 12667069
-
Peeling by binding or twisting by cranking: models for promoter opening and transcription initiation by RNA polymerase II.Bioessays. 2000 Apr;22(4):316-26. doi: 10.1002/(SICI)1521-1878(200004)22:4<316::AID-BIES2>3.0.CO;2-B. Bioessays. 2000. PMID: 10723029 Review.
Cited by
-
RNA polymerase I holoenzyme-promoter complexes include an associated CK2-like protein kinase.Plant Mol Biol. 2001 Oct;47(3):449-59. doi: 10.1023/a:1011619413393. Plant Mol Biol. 2001. PMID: 11587515
-
Survey and summary: transcription by RNA polymerases I and III.Nucleic Acids Res. 2000 Mar 15;28(6):1283-98. doi: 10.1093/nar/28.6.1283. Nucleic Acids Res. 2000. PMID: 10684922 Free PMC article. Review.
-
Opening of an RNA polymerase II promoter occurs in two distinct steps and requires the basal transcription factors IIE and IIH.EMBO J. 1996 Apr 1;15(7):1666-77. EMBO J. 1996. PMID: 8612591 Free PMC article.
-
Transcription initiation by RNA polymerase II does not require hydrolysis of the beta-gamma phosphoanhydride bond of ATP.EMBO J. 1994 Jan 15;13(2):391-9. doi: 10.1002/j.1460-2075.1994.tb06273.x. EMBO J. 1994. PMID: 8313884 Free PMC article.
-
Breaking the mold: structures of the RNA polymerase I transcription complex reveal a new path for initiation.Transcription. 2018;9(4):255-261. doi: 10.1080/21541264.2017.1416268. Epub 2018 Jan 15. Transcription. 2018. PMID: 29264963 Free PMC article. Review.
References
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
