Molecular analysis of three maize 22 kDa auxin-binding protein genes--transient promoter expression and regulatory regions

Plant J. 1993 Sep;4(3):423-32. doi: 10.1046/j.1365-313x.1993.04030423.x.

Abstract

The site I 22 kDa auxin-binding proteins from maize are encoded by a small gene family comprising at least five members. Here the cloning and molecular analysis of the Zm-ERabp1, Zm-ERabp4, and Zm-ERabp5 genes is presented. All three encode 22-23 kDa proteins displaying a transit peptide, a C-terminal KDEL sequence, as well as glycosylation and auxin-binding sites. The Zm-ERabp4 and Zm-ERabp5 genes are very similar. The Zm-ERabp1 gene encodes a related protein, but its promoter, leader and signal peptide are very different. Northern analysis using gene-specific oligonucleotide probes indicates that Zm-ERabp4 is expressed in leaves and coleoptiles but weakly in roots, whereas Zm-ERabp5 expression is barely detectable in these tissues. RNA-PCR indicated that all three genes are none the less expressed in many tissues. Primer-extension analysis revealed an unusually long (320 bases) Zm-ERabp1 leader containing an 80 codon ORF which, if expressed, would encode a positively charged protein with some similarity to transcription factors. In a transient promoter-reporter gene expression system using maize leaf protoplasts the Zm-ERabp1 promoter is more active than the Zm-ERabp4 and Zm-ERabp5 promoters. Promoter deletion analysis of Zm-ERabp1 has identified a negative regulatory sequence in a region from -364 bp and -130 bp, deletion of which results in about twofold higher expression. This region contains both enhancer- and G-box-related sequences. Deletion of -126 bp to +64 bp, which contains the TATA box and transcription start, results in a large decrease in expression.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • DNA, Complementary / genetics
  • Gene Expression
  • Genes, Plant*
  • Genes, Regulator
  • Genes, Reporter
  • Indoleacetic Acids / metabolism
  • Molecular Sequence Data
  • Plant Growth Regulators*
  • Plant Proteins / metabolism
  • Promoter Regions, Genetic
  • RNA / genetics
  • Receptors, Cell Surface / genetics*
  • Receptors, Cell Surface / metabolism
  • Restriction Mapping
  • Sequence Deletion
  • Sequence Homology, Amino Acid
  • Sequence Homology, Nucleic Acid
  • Tissue Distribution
  • Zea mays / genetics*
  • Zea mays / metabolism

Substances

  • DNA, Complementary
  • Indoleacetic Acids
  • Plant Growth Regulators
  • Plant Proteins
  • Receptors, Cell Surface
  • auxin receptor, plant
  • RNA

Associated data

  • GENBANK/L08425
  • GENBANK/L08426
  • GENBANK/L08427