Primary structure of OXA-3 and phylogeny of oxacillin-hydrolyzing class D beta-lactamases

Antimicrob Agents Chemother. 1995 Apr;39(4):887-93. doi: 10.1128/AAC.39.4.887.

Abstract

We determined the nucleotide sequence of the blaOXA-3(pMG25) gene from Pseudomonas aeruginosa. The bla structural gene encoded a protein of 275 amino acids representing one monomer of 31,879 Da for the OXA-3 enzyme. Comparisons between the OXA-3 nucleotide and amino acid sequences and those of class A, B, C, and D beta-lactamases were performed. An alignment of the eight known class D beta-lactamases including OXA-3 demonstrated the presence of conserved amino acids. In addition, conserved motifs composed of identical amino acids typical of penicillin-recognizing proteins and specific class D motifs were identified. These conserved motifs were considered for possible roles in the structure and function of oxacillinases. On the basis of the alignment and identity scores, a dendrogram was constructed. The phylogenetic data obtained revealed five groups of class D beta-lactamases with large evolutionary distances between each group.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Genes, Bacterial
  • Molecular Sequence Data
  • Phylogeny
  • Protein Conformation
  • Sequence Homology, Amino Acid
  • beta-Lactamases / chemistry*
  • beta-Lactamases / genetics

Substances

  • beta-lactamase OXA-2
  • beta-Lactamases

Associated data

  • GENBANK/L07945