Detection of dsRNA-binding domains in RNA helicase A and Drosophila maleless: implications for monomeric RNA helicases

Nucleic Acids Res. 1994 Jul 11;22(13):2552-6. doi: 10.1093/nar/22.13.2552.

Abstract

Searches with dsRNA-binding domain profiles detected two copies of the domain in each of RNA helicase A, Drosophila maleless and C. elegans ORF T20G5-11 (of unknown function). RNA helicase A is unusual in being one of the few characterised DEAD/DExH helicases that are active as monomers. Other monomeric DEAD/DExH RNA helicases (p68, NPH-II) have domains that match another RNA-binding motif, the RGG repeat. The DEAD/DExH domain appears to be insufficient on its own to promote helicase activity and additional RNA-binding capacity must be supplied either as domains adjacent to the DEAD/DExH-box or by bound partners as in the eIF-4AB dimer. The presence or absence of extra RNA-binding domains should allow classification of DEAD/DExH proteins as monomeric or multimeric helicases.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Chromosomal Proteins, Non-Histone*
  • DNA Helicases*
  • DNA-Binding Proteins*
  • Databases, Factual
  • Drosophila / enzymology
  • Drosophila / genetics*
  • Drosophila Proteins*
  • Humans
  • Male
  • Molecular Sequence Data
  • Nuclear Proteins / metabolism*
  • RNA Helicases
  • RNA Nucleotidyltransferases / metabolism*
  • RNA, Double-Stranded / metabolism*
  • Repetitive Sequences, Nucleic Acid
  • Sequence Homology, Amino Acid
  • Transcription Factors / metabolism*

Substances

  • Chromosomal Proteins, Non-Histone
  • DNA-Binding Proteins
  • Drosophila Proteins
  • Nuclear Proteins
  • RNA, Double-Stranded
  • Transcription Factors
  • mle protein, Drosophila
  • RNA Nucleotidyltransferases
  • DNA Helicases
  • RNA Helicases