Hypertransposing derivatives of the streptomycete insertion sequence IS493

Gene. 1994 Sep 15;147(1):47-54. doi: 10.1016/0378-1119(94)90037-x.

Abstract

Transposons derived from the Streptomyces lividans insertion sequence IS493 are useful for the genetic analysis and manipulation of a number of Streptomyces spp. Tn5099-10, an IS493 derivative that contains a spontaneous deletion terminating in the left inverted repeat (IR-L), transposed at a 1000-fold higher frequency in Streptomyces griseofuscus, and at a tenfold higher frequency in Streptomyces fradiae, than the IS493 derivatives, Tn5096 and Tn5099. The IR-L from Tn5099-10 was used to construct a cassette which hypertransposes from plasmids containing the transposon genes, ORFA and ORFB, outside of the inverted repeats. The target sequences of two Tn5099-10 insertions conformed to the consensus target sequence of the other IS493 derivatives, gNCaNTgNNy (where lower-case letters indicate that other nt have been observed at this position and N is any nt). Transposition mutant libraries of S. griseofuscus and S. fradiae can be easily prepared in broth culture by using the hypertransposing elements and a temperature-sensitive delivery plasmid.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Consensus Sequence
  • DNA Transposable Elements*
  • DNA, Bacterial / genetics
  • Genetic Engineering / methods
  • Molecular Sequence Data
  • Restriction Mapping
  • Sequence Alignment
  • Streptomyces / genetics*
  • Structure-Activity Relationship

Substances

  • DNA Transposable Elements
  • DNA, Bacterial