Thermodynamics of cyclophilin catalyzed peptidyl-prolyl isomerization by NMR spectroscopy

Biopolymers. 1994 Feb;34(2):171-5. doi: 10.1002/bip.360340203.

Abstract

One-dimensional nmr exchange spectroscopy was carried out to determine thermodynamic parameters of cyclophilin-induced cis-trans isomerization of succinyl-Ala-Phe-Pro-Phe-p-nitroanilide. Rate measurements were possible at physiological temperatures. The kc/Km of rat cyclophilin was found to be 12.8 (+/- 0.5) s-1 microM-1 at 37 degrees C, intermediate to previously reported values that used a coupled enzyme assay extrapolated to this temperature. Activation energies (delta G not equal to) for the uncatalyzed and catalyzed reaction at 37 degrees C were found to be 19.7 and 17.1 kcal/mol, respectively, and were primarily due to an enthalpic barrier.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Isomerases / chemistry*
  • Amino Acid Sequence
  • Carrier Proteins / chemistry*
  • Catalysis
  • Isomerism
  • Kinetics
  • Magnetic Resonance Spectroscopy / methods
  • Molecular Sequence Data
  • Peptidylprolyl Isomerase
  • Proline / chemistry*
  • Thermodynamics

Substances

  • Carrier Proteins
  • Proline
  • Amino Acid Isomerases
  • Peptidylprolyl Isomerase