Sequence analysis of four new heat-shock genes constituting the hslTS/ibpAB and hslVU operons in Escherichia coli

Gene. 1993 Nov 30;134(1):1-6. doi: 10.1016/0378-1119(93)90167-2.


Sequences of four new heat-shock (HS) genes of Escherichia coli organized into two operons were determined. The operon at 83 min specifies two proteins of 15.8 kDa (HslT) and 16.1 kDa (HslS), which are identical to IbpA and IbpB, respectively. Expression of mRNA from a sigma 32-dependent promoter of the hslTS/ibpAB operon is stimulated 30-75-fold upon temperature upshift. The transcription start point (tsp) is located at a G, 96 bp upstream from the AUG start codon of hslT/ibpA. The deduced amino acid sequences of HslT/IbpA and HslS/IbpB are 48% identical to each other and were found to be remotely related to the chloroplast low-molecular-weight HS protein, which is highly conserved among plants. The second hs operon is much less actively stimulated by temperature upshift, although it has a hs promoter that perfectly matches the consensus of promoters recognized by sigma 32. Located at 88.9 min, the hslVU operon specifies proteins of 19.1 kDa (HslV) and 49.6 kDa (HslU). Multiple tsp were found in this operon. HslV is remotely related to the eukaryotic proteasome proteins, and HslU is very similar to a Pasteurella haemolytica protein of unknown function. Both HslU and the P. haemolytica protein share a ATP/GTP-binding motif near their N-termini. The two operons described here are transcribed counterclockwise on the standard genetic map.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • ATP-Dependent Proteases
  • Amino Acid Sequence
  • Bacterial Proteins / genetics*
  • Base Sequence
  • DNA, Bacterial
  • Escherichia coli / genetics*
  • Heat-Shock Proteins / genetics*
  • Molecular Sequence Data
  • Operon*
  • RNA, Messenger / genetics
  • Sequence Analysis, DNA*
  • Sequence Homology, Amino Acid
  • Serine Endopeptidases*


  • Bacterial Proteins
  • DNA, Bacterial
  • Heat-Shock Proteins
  • RNA, Messenger
  • ATP-Dependent Proteases
  • Serine Endopeptidases

Associated data

  • GENBANK/L19201