N-carbamoyl-D-amino acid amidohydrolase from Comamonas sp. E222c purification and characterization

Eur J Biochem. 1993 Mar 15;212(3):685-91. doi: 10.1111/j.1432-1033.1993.tb17706.x.

Abstract

N-Carbamoyl-D-amino acid amidohydrolase was purified 119-fold, with 36% overall recovery from a cell-free extract of Comamonas sp. E222c. The purified enzyme was homogeneous as judged by SDS/PAGE. The relative molecular mass of the native enzyme was 120,000 and that of the subunit was 40,000. The purified enzyme hydrolyzed various N-carbamoyl-D-amino acids to D-amino acids, ammonia and carbon dioxide. N-Carbamoyl-D-amino acids having hydrophobic groups served as good substrates for the enzyme. The Km and Vmax values for N-carbamoyl-D-phenylalanine were 19.7 mM and 13.1 units/mg, respectively, and those for N-carbamoyl-D-p-hydroxyphenylglycine were 13.1 mM and 0.56 units/mg, respectively. The enzyme strictly recognized the configuration of the substrate and only the D-enantiomer of the N-carbamoyl amino acid was hydrolyzed. The enzyme activity was not significantly affected by N-carbamoyl-L-amino acids and ammonia. The enzyme was sensitive to thiol reagents and did not require metal ions for its activity. The enzyme did not hydrolyze N-carbamoyl-beta-alanine or N-carbamoyl-DL-aspartate suggesting that the enzyme is different from the N-carbamoylamide-hydrolyzing enzymes involved in the pyrimidine degradation pathway. The enzyme did not hydrolyze allantoin and allantoic acid, which are intermediates in purine degradation, N-carbamoylsarcosine and citrulline, suggesting that it is a novel N-carbamoylamide amidohydrolase.

MeSH terms

  • Amidohydrolases / isolation & purification*
  • Amidohydrolases / metabolism
  • Amino Acid Sequence
  • Amino Acids / analysis
  • Cell-Free System
  • Chromatography, Gel
  • Chromatography, Ion Exchange
  • Electrophoresis, Polyacrylamide Gel
  • Enzyme Stability
  • Hydrogen-Ion Concentration
  • Kinetics
  • Molecular Sequence Data
  • Pseudomonas / enzymology*
  • Substrate Specificity
  • Thermodynamics

Substances

  • Amino Acids
  • Amidohydrolases
  • N-carbamoyl-D-amino acid amidohydrolase