Localization of seven new genes around the HLA-A locus

Hum Mol Genet. 1993 Jan;2(1):55-60. doi: 10.1093/hmg/2.1.55.

Abstract

A yeast artificial chromosome (YAC B30) with a 320 kb insert of genomic DNA which includes the HLA-A gene was used to screen a cDNA library of human duodenal mucosa. Seven cDNA clones were isolated which correspond to seven new non-HLA class I structural genes. These new genes are located within a region that may well contain the gene responsible for hemochromatosis and have therefore been named HCG I-VII (Hemochromatosis Candidate Gene). HCG I, III, V and VI are probably single copy genes, situated at 180, 155, 140 and 230 kb centromeric to HLA-A, respectively. HCG II, IV and VII present several copies: one copy of HCG II, one of HCG IV and one of HCG VII are centromeric to HLA-A (at 30, 70 and 100 kb respectively). Another copy of HCG IV is 20 kb telomeric to HLA-A. Each of the genes localized on the YAC B30 is associated with an CpG/HTF island.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Blotting, Southern
  • Cell Line
  • Chromosomes, Fungal
  • DNA / genetics*
  • Duodenum
  • Gene Library
  • Genes*
  • Genes, MHC Class I*
  • HLA-A Antigens / genetics*
  • Hemochromatosis / genetics
  • Humans
  • Intestinal Mucosa / immunology
  • Organ Specificity
  • Restriction Mapping
  • Saccharomyces cerevisiae / genetics

Substances

  • HLA-A Antigens
  • DNA