Human cone-specific cGMP phosphodiesterase alpha' subunit: complete cDNA sequence and gene arrangement

FEBS Lett. 1996 Feb 26;381(1-2):149-52. doi: 10.1016/0014-5793(96)00104-4.

Abstract

Four independent phage clones containing the fragments of cone-specific cGMP phosphodiesterase (PDE) alpha' subunit (PDE-alpha') cDNA were isolated from the human cDNA library. The screening of the genomic library resulted in isolation of four independent phage clones with the fragments of human cone PDEalpha' gene including 5'-flanking region and exons ranged from 1 to 14 (overall 32 kilobases). Structural studies of the clones made it possible to establish the complete human cone PDEalpha' cDNA structure (3455 base pairs). The encoding polypeptide consists of 858 amino acid residues with a calculated molecular mass of 99169 Da. The deduced amino acid sequence displays high homology to the earlier analyzed catalytic alpha, beta and alpha' subunits of bovine, human, chicken and mouse photoreceptor PDEs.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3',5'-Cyclic-GMP Phosphodiesterases / biosynthesis
  • 3',5'-Cyclic-GMP Phosphodiesterases / genetics*
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Cattle
  • Chickens
  • Cloning, Molecular
  • DNA, Complementary / chemistry
  • Exons
  • Gene Library
  • Genomic Library
  • Humans
  • Introns
  • Macromolecular Substances
  • Mice
  • Molecular Sequence Data
  • Organ Specificity
  • Photoreceptor Cells / enzymology
  • Restriction Mapping
  • Retina / enzymology
  • Retinal Cone Photoreceptor Cells / enzymology*
  • Sequence Homology, Amino Acid

Substances

  • DNA, Complementary
  • Macromolecular Substances
  • 3',5'-Cyclic-GMP Phosphodiesterases

Associated data

  • GENBANK/X94354