Region 2 of the Escherichia coli K5 capsule gene cluster encoding proteins for the biosynthesis of the K5 polysaccharide

Mol Microbiol. 1995 Aug;17(4):611-20. doi: 10.1111/j.1365-2958.1995.mmi_17040611.x.

Abstract

The nucleotide sequence of region 2 of the Escherichia coli K5 capsule gene cluster has been determined. This region, essential for the biosynthesis of the K5 polysaccharide, contained four genes, termed kfiA-D. The G + C ratio was 33.4%, which was lower than the typical G + C ratio for E. coli and that of the flanking regions 1 and 3 in the K5 capsule gene cluster. Three major RNA transcripts were detected within region 2 by Northern blotting and three promoters located by transcript mapping. Promoter activity was confirmed by promoter-probe analysis. The predicted amino acid sequence of KfiC had homology to a number of glycosyl transferase enzymes and overexpression of the KfiC gene resulted in increased K5 transferase activity. The predicted amino acid sequence of KfiD had homology to a number of NAD-dependent dehydrogenase enzymes and was demonstrated to be a UDP-glucose dehydrogenase that catalyses the information of UDP-glucuronic acid from UDP-glucose.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacterial Capsules / genetics*
  • Bacterial Proteins / genetics*
  • Base Composition
  • Base Sequence
  • Blotting, Northern
  • Chromosome Mapping
  • Escherichia coli / genetics*
  • Escherichia coli Proteins*
  • Genes, Bacterial*
  • Glycosyltransferases*
  • Molecular Sequence Data
  • Multigene Family
  • Polysaccharides, Bacterial / biosynthesis*
  • Promoter Regions, Genetic
  • RNA, Messenger / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Sequence Homology, Nucleic Acid
  • Uridine Diphosphate Glucose Dehydrogenase / genetics

Substances

  • Bacterial Proteins
  • Escherichia coli Proteins
  • Polysaccharides, Bacterial
  • RNA, Messenger
  • KfiD protein, E coli
  • Uridine Diphosphate Glucose Dehydrogenase
  • Glycosyltransferases
  • KfiC protein, E coli

Associated data

  • GENBANK/X77617