Polynucleotide: adenosine glycosidase activity of saporin-L1: effect on DNA, RNA and poly(A)

Biochem J. 1996 Oct 15;319 ( Pt 2)(Pt 2):507-13. doi: 10.1042/bj3190507.

Abstract

The ribosome-inactivating proteins (RIPs) are a family of plant enzymes for which a unique activity has been determined: rRNA N-glycosidase, which removes adenine at a specific universally conserved position (A4324 in the case of rat ribosomes). Here we report that saporin-L1, a RIP from the leaves of Saponaria officinalis, recognizes other substrates, including RNAs from different sources, DNA and poly(A). Saporin-L1 depurinated DNA extensively and released adenine from all adenine-containing polynucleotides tested. Adenine was the only base released from DNA or artificial polynucleotides. The characteristics of the reactions catalysed by saporin-L1 have been determined: optimal pH and temperature, ionic requirements, and the kinetic parameters Km and kcat. The reaction proceeded without cofactors, at low ionic strength, in the absence of Mg2+ and K+. Saporin-L1 had no activity towards various adenine-containing non-polynucleotide compounds (cytokinins, cofactors, nucleotides). This plant protein may now be classified as a polynucleotide: adenosine glycosidase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Binding Sites
  • DNA / metabolism*
  • Immunotoxins*
  • Kinetics
  • N-Glycosyl Hydrolases / isolation & purification
  • N-Glycosyl Hydrolases / metabolism*
  • Plant Proteins / metabolism*
  • Plants
  • RNA / metabolism*
  • RNA, Messenger / metabolism*
  • Rats
  • Ribosome Inactivating Proteins
  • Ribosome Inactivating Proteins, Type 1
  • Saporins
  • Substrate Specificity

Substances

  • Immunotoxins
  • Plant Proteins
  • RNA, Messenger
  • Ribosome Inactivating Proteins, Type 1
  • RNA
  • DNA
  • N-Glycosyl Hydrolases
  • Ribosome Inactivating Proteins
  • Saporins