The topology of transcription by immobilized polymerases

Exp Cell Res. 1996 Dec 15;229(2):167-73. doi: 10.1006/excr.1996.0355.

Abstract

Current models for RNA synthesis involve an RNA polymerase that tracks along a static template. However, research on chromatin loops suggests that the template slides past a polymerase immobilized in a large transcription factory. The evidence for immobilized polymerases is reviewed, and a model for transcription by such fixed enzymes is presented. According to the model, gene activation would involve reducing gene-factory distance and increasing the affinity of a promoter for a factory. Locus controlling regions and enhancers would attach to a factory and increase the chances that a promoter could bind to a polymerase; after transcriptional termination, the gene would detach from the factory. As some RNA processing occurs cotranscriptionally, processing sites are also likely to be associated with the factory.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • DNA / genetics
  • DNA / metabolism
  • DNA-Directed RNA Polymerases / metabolism*
  • Enzymes, Immobilized
  • Gene Expression Regulation
  • Models, Genetic*
  • Promoter Regions, Genetic
  • RNA / biosynthesis
  • RNA / genetics
  • RNA Processing, Post-Transcriptional
  • Transcription, Genetic*
  • Transcriptional Activation

Substances

  • Enzymes, Immobilized
  • RNA
  • DNA
  • DNA-Directed RNA Polymerases