Solution structure of a unique C5a semi-synthetic antagonist: implications in receptor binding

Protein Sci. 1997 Jan;6(1):65-72. doi: 10.1002/pro.5560060107.

Abstract

The tertiary structure of a unique C5a receptor antagonist was determined by two-dimensional NMR spectroscopy. The core domain of this 8-kDa antagonist exists as an antiparallel helical bundle, similar to recombinant human (rh)-C5a. However, unlike C5a, the antagonist's C terminus was found to be conformationally restricted along a groove between helices one and four in the core domain. This conformational restriction situates C-terminal D-Arg 75 in a wedge between core residues Arg 46 and His 15. Correlation of the antagonist's tertiary structure with point mutation analysis revealed the formation of a positively charged contiguous contact surface comprised of D-Arg 75, Arg 46, Lys 49, and His 15. The significance of this surface in generating antagonist properties implies a single binding site with the C5a receptor and provides a structural template for drug design.

MeSH terms

  • Amino Acid Sequence
  • Antigens, CD / metabolism
  • Antigens, CD / physiology*
  • Complement C5a / genetics
  • Complement C5a / metabolism*
  • Drug Design
  • Humans
  • Magnetic Resonance Spectroscopy
  • Molecular Sequence Data
  • Mutagenesis
  • Protein Structure, Tertiary
  • Receptor, Anaphylatoxin C5a
  • Receptors, Complement / antagonists & inhibitors*
  • Receptors, Complement / metabolism
  • Receptors, Complement / physiology*
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism

Substances

  • Antigens, CD
  • Receptor, Anaphylatoxin C5a
  • Receptors, Complement
  • Recombinant Proteins
  • Complement C5a