Catalysis of the CC-1065 and duocarmycin DNA alkylation reaction: DNA binding induced conformational change in the agent results in activation

Bioorg Med Chem. 1997 Feb;5(2):263-76. doi: 10.1016/s0968-0896(96)00238-6.

Abstract

A number of indirect observations are summarized that suggest the rate acceleration for the CC-1065 and duocarmycin. DNA alkylation reaction is derived in part from a DNA binding-induced conformational change in the agents which substantially increases their inherent reactivity. This ground-state destabilization of the agent, which we suggest results from a binding-induced twist in the linking N2 amide and requires a rigid extended N2 amide substituent, disrupts the vinylogous amide stabilization and activates the agents for DNA alkylation.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alkylation
  • Antibiotics, Antineoplastic / chemistry
  • Antibiotics, Antineoplastic / metabolism*
  • DNA / metabolism*
  • Duocarmycins
  • Indoles*
  • Leucomycins / chemistry
  • Leucomycins / metabolism*
  • Molecular Conformation
  • Stereoisomerism

Substances

  • Antibiotics, Antineoplastic
  • Duocarmycins
  • Indoles
  • Leucomycins
  • CC 1065
  • DNA