Structure of the repeating oligosaccharide from the lipopolysaccharide of the nitrogen-fixing bacterium Acetobacter diazotrophicus strain PAL 5

Carbohydr Res. 1997 Mar 13;298(4):311-8. doi: 10.1016/s0008-6215(96)00326-6.

Abstract

Acetobacter diazotrophicus is an acid-tolerant nitrogen-fixing bacterium found in roots, rhizosphere, stems, and leaves of sugar cane (Saccharum officinarum) cultivated in Brazil. The O-polysaccharide from the lipopolysaccharide of the root isolate strain PAL 5 has been determined by a combination of methylation analysis and two-dimensional high field NMR spectroscopy. The pentasaccharide repeat has the structure: [formula: see text] Minor resonances in the NMR spectra are consistent with the presence of a proportion of repeating units which lack the beta-D-Glc side-chain.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetobacter / chemistry*
  • Carbohydrate Sequence
  • Lipopolysaccharides / chemistry*
  • Magnetic Resonance Spectroscopy
  • Methylation
  • Molecular Sequence Data
  • Nitrogen Fixation / physiology*
  • Oligosaccharides / chemistry*

Substances

  • Lipopolysaccharides
  • Oligosaccharides